Cell Biophysics II

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Mária Kožurková (ed.)

Book of Abstracts

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Renáta Oriňaková

We have prepared a publication that focuses on the personalities of professors. These personalities represent entire scientific teams, participated in the creation of new study programs, and had a significant impact on the formation of the faculty. Factually, we tried to capture the basic data in a uniform structure. We are building on a similar publication from ten years ago, which greatly helped us, especially with professors who worked at the faculty many years ago and whose memories are gradually fading. The ambition of the publication is to contribute to the preservation of basic information that is closely related to the history of the faculty.

doc. RNDr. Roman Soták, PhD. Dean of the Faculty of Science, UPJŠ in Košice

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Pavol Mártonfi

The university textbook deals with the latest knowledge from the systematics of vascular plants in a clear manner. Vascular plants arose in the Silurian period in the Paleozoic, when the first primitive plants moved from water to dry land, which required evolutionary progress in the morphological and anatomical structure of these plants. During about 420 million years of the existence of vascular plants, several of their main groups have evolved: the spore vascular plants, including the lycopods (branch Lycopodiophyta) and group of ferns and related plants (branch Monilophyta), and the seed plants, including gymnosperms (branch Gymnospermae) and angiosperms ( Angiospermae), which currently dominate among plants. The textbook provides a brief but comprehensive overview of the main groups, orders and families of plants with their description, distribution, main representatives, while also addressing the useful properties of selected species. The work is complemented by an overview of the system of plants by Cronquist, Tachtadžjan, APG and an overview of the families of the Slovak flora, as well as a taxonomic index.

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Mária Vilková-Zuzana Kudličková-Ján Elečko
This study material is intended for students of chemistry and related disciplines interested in applied nuclear magnetic resonance (NMR) and physical chemistry. It offers practice-oriented tasks designed to develop skills in NMR spectroscopy, quantitative analysis, and data interpretation. Students learn modern approaches to determining physicochemical parameters (e.g., partition coefficients, pKa values, keto–enol equilibria, or enantiomeric excess) and gain experience with software tools for spectrum processing.
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Erik Čižmár

The textbook "Special Practicum II" is dedicated to describing experimental methods used for studying the magnetic properties of solid materials, especially low-dimensional and molecular magnets. It subsequently contains instructions for the practical exercise "Special Practicum II," during which master's and doctoral students use state-of-the-art commercial equipment-an electron paramagnetic resonance (EPR) spectrometer and a SQUID magnetometer.

The introductory chapter briefly describes the origin of magnetism in solids, the role of the crystal field, and magnetic interactions in explaining their magnetic properties. This is followed by an explanation of the principles of EPR, the operation of the EPR spectrometer, and the optimization of its parameters for the specific practical exercise.

The next part of the textbook is devoted to an overview of the behavior of magnetic quantities with changes in magnetic field or temperature in various types of magnets. The textbook concludes with a description of the operating principle of the SQUID magnetometer and an example of its use in a practical exercise measuring the magnetic moment.

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Adriana Zeleňáková

One of the fundamental characteristics of the magnetic state of ferromagnetic materials is the existence of a domain structure. The university textbook "MAGNETIC DOMAINS: SPECIAL PHYSICAL PRACTICE 1" is intended primarily for students of the Master's programme in Physics of Condensed Matter FKLm and for the PhD programme in Progressive Materials PMd within the profile subject Special Practice 1 at the Institute of Physical Sciences of the Faculty of Sciences of the Pavol Jozef Šafárik University in Košice.  The textbook is divided into seven chapters. The first chapter is devoted to the basics of domain theory, including the history of domain observation and the specification of different types of energies in ferromagnetic body. The second chapter presents the relationship between domain structure and magnetisation processes in ferromagnetic materials The third chapter describes the different types of domain-wall interactions with the defect. The fourth chapter illustrates examples of domain structure in selected ferromagnetic body such as grain oriented and non-grain oriented electrical steels, amorphous and nanocrystalline ribbons. The fifth chapter summarises an overview of the different experimental methods used to visualise the domain structure and their advantages or disadvantages with respect to the structure of ferromagnetic materials. The last two chapters, the sixth and the seventh, are devoted to specific experimental tasks for observing the domain structure of a selected polycrystalline sample using the optical microscope Bitter powder method and the MFM (magnetic force microscopy) method. During the preparation of this undergraduate text, its individual parts were developed using the foreign language literature listed in the recommended references.

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Katarína Kimáková

The textbook is intended for university students who are preparing for the profession of biology teacher. The structure of the book is similar to an encyclopedia, with one page devoted to each content item, but the topics of the chapters and subchapters follow each other.

The explanatory text on the page illustrates the diagram and there are notes and links to other sources of information. For better orientation, the content of the textbook is divided into 8 sections, which cover several chapters. It follows the general didactics, which it connects with the teaching of biological content. The book provides a basic orientation in the approaches to learning this subject, and also explains the relationship between biology as a science and the didactics of biology. It deals with teaching standards and curricula, advises on how to master biological concepts and understanding, how to communicate with students in biology classes, when and why are effective visual and practical methods. It acquaints the reader with the issue of setting goals for biological education in the cognitive, psychomotor and affective areas in relation to formative and summative assessment.

Hopeful as well as experienced teachers will find in this publication not only a look into the history of teaching biology, but also a look into the future. Current trends in biology teaching, the connection of teaching with digital technologies, the virtual learning environment and interactive simulations and models belong to science lessons today.

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E-publication
Beáta Valkay ed.
Ivana Slepáková-Andrej Mock a kol.

The textbook EFFUSE – River Landscape, Volume 1: Scientific Education for Everybody, developed within the EFFUSE project, explores the importance of water for living organisms and the specific features of water in the Transcarpathian region. It addresses the issue of water pollution and presents bioindication as an effective method of environmental research. The publication explains how the ecological status of rivers and water quality can be assessed using aquatic plants, insects, fish, and amphibians. It also raises awareness about the microbial composition of water and offers guidance on protecting oneself from waterborne infections. Finally, it highlights the significance of environmental education and awareness in strengthening the relationship between humans and the natural environment.

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Monika Tvrdoňová - Miroslava Martinková

The scientific book of abstracts from conference „Novel Trends in Chemistry, Research and Education 2022“ is a summary of the contributions of conference participants, which contain the original results of their scientific and research activities. The contributions published in this volume can be divided according to content into the field of analytical, inorganic, organic, physical chemistry, biochemistry, didactics of chemistry and NMR spectroscopy.

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Jozef Bednarčík (ed.)

The SFEL school is continuation of the Winter Schools of Synchrotron radiation held in 2011, 2013, 2014 and SFEL 2017, 2018 and 2019. All schools of the series were held here, in Liptovský Ján, where our conference venue offers conditions for friendly and creative atmosphere.

The aim of the SFEL 2022 school is to facilitate the growth of a new Slovak research community with high expertise in the area of high-efficiency RTG laser, synchrotron and neutron sources. The SFEL school is designed for efficient transfer of the rapidly developing know-howin these areas to young generation – researchers and university students. The next aim of the SFEL2022 is strengthening of personal connections between the local Slovak research community and actually forming scientific teams of XFEL users, scientific teams of synchrotron or neutron sources users, respectively.

Slovak research community thus can take advantage of the fact that Slovakia is a shareholder of the European XFEL GmbH company in Hamburg, but also makes more efficient use of other closely related scientific facilities, including ILL and ESRF in Grenoble and DESY in Hamburg.

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Ľubomír Kováč

Učebný text „Zoogeografia“ objasňuje základné princípy a historický vývoj rozšírenia živočíchov na Zemi, a ďalej analyzuje faktory, ktoré ho ovplyvňujú. Vďaka moderným vedeckým metódam a technikám výskumu je zoogeografia veľmi dynamicky sa rozvíjajúcou disciplínou. Z geologických etáp je podrobnejšie spracovaná problematika paleoklimatických cyklov kvartéru, holocénu a vývoja postglaciálnej klímy, ktoré zohrali významnú úlohu pri dynamike vývoja živočíšnych areálov. Areálová analýza charakterizuje a triedi areály živočíchov a ich dynamiku v nadväznosti na speciáciu. Podrobne je spracovaná problematika zoogeografických oblastí s dôrazom na palearktickú oblasť. Časť zameraná na dynamickú zoogeografiu rieši najmä problematiku refúgií a reliktov v súvislosti s vývojom pleistocénnej paleoklímy. Text stručnou formou sumarizuje základné antropogénne faktory, ktoré v recentnej dobe drastickým spôsobom limitujú rozšírenie živočíchov v rýchlo ubúdajúcom prírodnom prostredí na Zemi. Text ďalej prehľadným spôsobom charakterizuje biogeografiu Karpát a faunu územia Slovenska. Záverečná časť prezentuje fylogeografiu ako modernú vednú disciplínu zameranú na rekonštrukciu migračných ciest v postglaciáli, ktorá je podložená analýzou molekulárnych markerov populácií živočíchov v širšom geografickom kontexte. 

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Gabriel Semanišin - Emil Hutňan - Jana Oleničová

The proceedings contain contributions from participants of the UNIFOS 2014 conference, University Information Systems in Košice, which took place from October 27 to 29, 2014.

ICT centers are important element that provide functioning and development hardware and software infrastructure at Slovak Universities. There are more differences between them in real position, management, personal sources and financing. ICT centers provide a wide range of services to large number of university users and they implement the policy of information security recently.

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Miroslava Martinková

This electronic material provides the basic principles of creating a systematic nomenclature of organic compounds, from the simplest hydrocarbons to the more complicated nomenclature of carbohydrates. For some groups of derivatives, alternative ways of generating system names are also mentioned, as well as the most common trivial names that are still in use in the literature and in practice, in some cases being the characteristic (dominant) ones. In the introductory section, the basic rules to be respected when writing names of organic compounds are discussed. This document is intended primarily for interdisciplinary undergraduate and graduate students as support material for the courses Organic Chemistry and Selected Chapters in Organic Chemistry and Biochemistry. In the final section of this document, solved examples are given so that the student can check how the rules for forming the names of organic compounds have been understood.

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Vladimír Zeleňák (ed.)

The publication contains abstracts of contributions presented at the Student Scientific Conference of the Faculty of Natural Sciences at UPJŠ in Košice, held on April 25, 2013. The event was marked by the celebration of the 50th anniversary of the Faculty of Natural Sciences at UPJŠ and was part of a series of events called ScienceFest.

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Jozef Strečka-Katarína Karľová

The proceedings include the programme and abstracts of the workshop Magnetic Cooling and Frustrated Magnetism, held in Košice on October 27–29, 2025. The event is organized with the support of the French National Research Agency (ANR), the Faculty of Science of Pavol Jozef Šafárik University in Košice, and the Slovak Research and Development Agency. The workshop focuses on current challenges in quantum physics, particularly frustrated magnetism and magnetic cooling. Participants will present original research results that may significantly contribute to the development of future quantum technologies.

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Miroslav Almáši(ed.)

The proceedings of the conference 60 YEARS OF SCIENCE AND EDUCATION IN THE FIELD OF INORGANIC CHEMISTRY IN EASTERN SLOVAKIA comprise a collection of scholarly and scientific contributions presented on the occasion of the 60th anniversary of the establishment of the Department of Inorganic Chemistry at the Institute of Chemistry, Faculty of Science, Pavol Jozef Šafárik University in Košice. The conference focused on reviewing the scientific, research, and educational activities in the field of inorganic chemistry in eastern Slovakia and highlighting significant achievements accomplished over the sixty-year history of the department. The abstracts included in the proceedings cover a broad range of topics that reflect current trends and directions in inorganic chemistry. The proceedings are thematically divided into four main areas, encompassing contributions dedicated to inorganic, coordination, bioinorganic, and materials chemistry. This collection offers a valuable overview of the current state of research in inorganic chemistry, as well as its teaching and historical development in eastern Slovakia..

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