Praktické cvičenia z biochémie

E-book

Milan Žukovič

This textbook is intended for master's degree students and is a follow-up to the Computational Physics I course studied at the bachelor's level. The content of the textbook Computational Physics II focuses on stochastic methods of solving physical problems, mainly on Monte Carlo (MC) simulation of many-particle systems.

The focus on this computationally intensive approach is motivated by the gradual increase in the computing capacities of ordinary computers as well as the introduction of high-performance computing clusters. This has led to significant progress in the development of new simulation techniques, thanks to which MC simulations have found application in various areas of research and application practice. Considering the main research focus of the department, this text is particularly devoted to the presentation of basic and more advanced MC simulation techniques applied to a simple Ising spin model in order to investigate its magnetic, thermodynamic and critical properties.

The next part is devoted to MC simulations of random processes. It focuses on the simplest but also the most basic random walk process and demonstrates its applications in financial analysis and the solution of a quantum system described by the time-dependent Schrödinger equation. The last part is dedicated to the basics of molecular dynamics, applied to simulating the classical movement of atoms in a given force field. By mastering the problems addressed in this course, students will obtain a potential tool for working out of their diploma theses, or a methodology useful for their further scientific and research practice in the field of investigating of complex systems.

The lectured topic is subsequently exercised in the form of preparing projects implemented in the freely distributable software Octave, which is easy on the user's programming skills and which students have the opportunity to familiarize themselves with in the previous study.

Download e-book for free (pdf)

E-book

Jozef Bednarčík (ed.)

The SFEL school is continuation of the Winter Schools of Synchrotron radiation held in 2011, 2013, 2014 and SFEL 2017, 2018 and 2019. All schools of the series were held here, in Liptovský Ján, where our conference venue offers conditions for friendly and creative atmosphere.

The aim of the SFEL 2022 school is to facilitate the growth of a new Slovak research community with high expertise in the area of high-efficiency RTG laser, synchrotron and neutron sources. The SFEL school is designed for efficient transfer of the rapidly developing know-howin these areas to young generation – researchers and university students. The next aim of the SFEL2022 is strengthening of personal connections between the local Slovak research community and actually forming scientific teams of XFEL users, scientific teams of synchrotron or neutron sources users, respectively.

Slovak research community thus can take advantage of the fact that Slovakia is a shareholder of the European XFEL GmbH company in Hamburg, but also makes more efficient use of other closely related scientific facilities, including ILL and ESRF in Grenoble and DESY in Hamburg.

Download the e-book for free (pdf)

E-book

Jana Shepa (ed.)

The book of abstracts from 7th International Conference on Novel Materials: Fundamentals and Applications, NFA 2023 is composed of contributions from the participants of this international conference. The conference consisted of 3 invited lecture and 40 abstracts of participants. The conference is focused on novel materials and its application in various research areas. All contributions are professionally processed and inspiring.

Download the e-book for free (pdf)

E-book

Jozef Strečka,Katarína Karľová

The 48th Conference of the Middle European Cooperation in Statistical Physics (MECO48) will be held on May 22nd-26th, 2023, in Stará Lesná, High Tatras, Slovakia. The MECO48 conference continues a long tradition of regular international meetings in the domain of statistical physics established in the early 1970s with the aim of bridging the gap between the communities of scientists from the Eastern and Western parts of Europe separated by the iron curtain.

In the modern era the MECO conferences attract attention of the community of scientists who are active in the field of statistical physics including various interdisciplinary applications to biology, medicine, geography, finance, quantum information theory, and machine learning.

The MECO48 conference is organized jointly by Faculty of Science of Pavol Jozef Šafárik University in Košice, Institute of Experimental Physics of Slovak Academy of Sciences in Košice, Institute of Physics, Slovak Academy of Sciences in Bratislava and Faculty of Humanities and Natural Sciences, University of Prešov under the financial support of Slovak Research and Development Agency (grant No. APVV-20-0150) and other sponsors.

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E-book

Zuzana Orságová Králová (ed.)

The scientific book of abstracts is a summary of the contributions of teachers, scientists and other conference participants, which contain the original results of their scientific and research activities. Their work will be the subject of the next domestic conference "New trends in chemistry, research and education 2019". The conference is a space for dialogue between scientific academics on the one hand and professional staff and students on the other.

The contributions published in this volume can be divided according to content into the field of analytical, inorganic, physical, organic chemistry, biochemistry and didactics of chemistry. All contributions are interesting and can be used in further creative scientific and research work, in the process of education and in practical work.

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E-book

Janka Vrláková - Stanislav Vokál

Atomic and nuclear physics are relatively young scientific disciplines forming the final part of the general physics course at the Faculty of Physics of the Jagiellonian University. Their aim is to explain the nature of the basic physical properties of atoms, atomic nucleus and elementary particles.

This is also the content of the lectures and exercises ‘General Physics IV’ in the 2nd year of the Bachelor's degree in Physics at the Faculty of Natural Sciences (PF) of the P.J. Šafárik University (UPJŠ) in Košice. They are followed by optional lectures ‘Nuclear Radiation in the Environment’, ‘Introduction to the Physics of the Microworld’ in the 3rd year of the Bachelor's degree of single-discipline study of physics, or teacher study of physics in combination with another subject, and ‘Subnuclear Physics’ in the 1st year of the Master's degree of teacher study of physics in combination with another subject.

In the aforementioned lectures, the latest experimental findings on the structure and behaviour of the microworld are presented by means of physical theories and their subsequent experimental verification in experiments.

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E-book

Juraj Ševc - Filip Mochnacký

Students studying biology as the single-subject or as a part of two-subject programs on various faculties of sciences are often encountered with the problem, how to limit the topics in the subject Human anatomy. This List of anatomical terms is aiming to help the non-medical students to get acquainted with the extensive anatomical nomenclature and to optimize the number of anatomical terms, which should be memorized, to preserve the sufficient capacity of the students for another knowledge of the field of systemic, comparative, developmental and functional anatomy. The emphasis on the arrangement of individual anatomical terms into the logical units supports the hierarchical view on the architecture of the human body.

Despite the common opinion, anatomical nomenclature represents a framework, which is during the further study gradually enveloped with the knowledge of more or less related disciplines concerning with the human body and its biological processes. Moreover, besides this ambition, which exceeds the area of the human anatomy, this List of anatomical terms continues the long tradition with respect to the valid Latin and Slovak anatomical terminology.

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Ján Kleban a kolektív

Predkladaný pracovný zošit na praktické cvičenia z cytológie je určený poslucháčom 1. ročníka bakalárskeho štúdia biológie a 1. ročníka bakalárskeho medziodborového štúdia v kombinácii s biológiou na Prírodovedeckej fakulte Univerzity Pavla Jozefa Šafárika v Košiciach. Slúži ako návod, ktorý má študentom uľahčiť prácu a umožniť rýchlejšiu orientáciu v zadanej úlohe. Úprava pracovného zošita do formy protokolov umožňuje študentom zakresliť vlastné pozorovanie a tým stimuluje študentov k presnejšiemu a trvalejšiemu zapamätaniu si precvičovanej úlohy a zároveň umožňuje spätnú kontrolu pedagógom. Počas cvičení sa študenti postupne oboznámia so základnými pojmami optiky, s aplikáciami využívajúcimi mikroskopickú techniku, ale aj so základnými rozdielmi medzi štruktúrou rastlinnej a živočíšnej bunky a ich organelami.

Jana Šandrejová - Andrea Gajdošová (eds.)

The scientific book of abstracts from the conference „Novel Trends in Chemistry, Research and Education 2024“ is a summary of the contributions of conference participants, which contain the original results of their scientific and research activities. The contributions published in this volume are divided according to content into the fields of analytical, inorganic, organic, physical chemistry, biochemistry and didactics of chemistry.

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E-book

Adriana Zeleňáková - Zuzana Ješková - Adela Kravčáková  et al. (eds.)

The proceedings contain abstracts of contributions from participants of the 10th Czech-Slovak Student Scientific Conference in Physics, which took place on May 2–3, 2019, at the Faculty of Science, Pavol Jozef Šafárik University in Košice.

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E-book

Zuzana Jurašeková

Úvod k praktikám k experimentálnym metódam biofyziky

The university textbook titled Laboratory Techniques and Calculations is designed for the first-year students of the bachelor's degree in Biophysics at the Institute of Physics, Faculty of Sciences, P. J. Šafárik University in Košice. The objective is to equip students with fundamental knowledge and practical skills for the work in a chemical laboratory. It is essential for addressing different biophysical issues and experiments that students will have to solve later. The textbook comprises three principal sections: a theoretical part focused on the calculations, a section dedicated to laboratory work, and the last part offers a brief introduction to spectroscopy. The theoretical part summarizes the basic definitions and equations related to the characterization and preparation of solutions and mixtures. The second, most comprehensive part provides guidance and suggestions for safe and efficient practices in a chemical laboratory. The primary focus is on the manipulation of chemical substances and the use of specific small laboratory instruments and equipment. The fundamental laboratory procedure guides for the selected laboratory works are also provided. As part of a short introduction to spectroscopy, students can become familiar with fundamental spectroscopic concepts and principles. UV-VIS absorption spectrophotometry receives special attention, along with a brief introduction to fluorescence. The textbook is supplemented by various practical and theoretical tasks, as well as numerous web links to further explanatory texts and videos.

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E-book

Zuzana Orságová Králová (ed.)

The scientific book of abstracts is a summary of the contributions of teachers, scientists and other conference participants, which contain the original results of their scientific and research activities. Their work will be the subject of the next domestic conference „New Trends in Chemistry, Research and Education at Faculty of Science of P. J. Šafárik University in Košice 2020“. The conference is a space for dialogue between scientific academics on the one hand and professional staff and students on the other.

The contributions published in this volume can be divided according to content into the field of analytical, inorganic, physical, organic chemistry, biochemistry and didactics of chemistry. All contributions are interesting and can be used in further creative scientific and research work, in the process of education and in practical work.

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Danica Studenovská a kol. 

Táto zbierka úloh je určená poslucháčom Prírodovedeckej fakulty UPJŠ, ktorí sa v rámci predmetu Matematika I. zoznamujú s pojmami funkcie, limity, derivácie, integrálu a ich aplikáciami. Ide najmä o študentov nematematických odborov a učiteľských kombinácií, avšak táto zbierka je vhodná aj pre iných študentov a záujemcov o základy matematickej analýzy.

Autori

E-book

Jozef Bednarčík

Crystallography deals with discerning the arrangement and bonding of atoms in crystalline solids. Almost immediately after their discovery, X-rays began to be used to study the internal structure of substances.

The first chapter of this textbook deals with the basic concepts of crystallography. At the beginning, crystalline solids are characterized. In the next section, the basic types of bonds and their characteristics are briefly presented. The main subject of this chapter is the interpretation of basic concepts such as symmetry operations, translational periodicity, grid, elementary cell. Spatial lattices and crystal systems are presented. At the end of this chapter, attention is paid to the description of individual types of defects in crystal structures. In the second chapter, the Bohr model of the hydrogen atom is presented. Individual quantum numbers and their meaning are given.

Next, energy levels and allowed transitions within an atom with multiple electrons are described. The second chapter concludes with the characterization of the basic absorption and emission processes. The third chapter is devoted to the production of X-ray radiation and its properties. Sources of X-ray radiation and a description of their operation are presented.

Interaction of X-ray radiation with matter, absorption and detection of X-ray radiation are the subject of the last part of this chapter.

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E-book

Juraj Ševc - Anna Alexovič Matiašová

Among students of single-discipline and interdisciplinary biology studies at faculties with a natural science focus, there often arises a problem in defining the scope of the curriculum when studying the subject of Human Anatomy. The presented study material aims to help students of non-medical scientific fields navigate the extensive anatomical terminology and to limit the amount of required anatomical terms to an optimum, so that alongside mastering Latin nomenclature, students still have sufficient capacity to memorize additional knowledge in the areas of systemic, comparative, developmental, and functional anatomy.

Emphasis on organizing individual anatomical terms into logical units simultaneously supports a hierarchical view of the architecture of the human body. Despite its seemingly self-serving nature, anatomical terminology thus becomes the framework upon which students build knowledge from more or less related scientific disciplines studying the human body and the processes occurring within it throughout their further studies. At the same time, alongside this ambition that goes beyond the scope of the anatomy discipline, the Anatomical Terms follow a long tradition of anatomical handbooks while respecting the valid Latin and Slovak anatomical nomenclature.

This script represents a practical supplement to university textbooks of Anatomy or Neuroanatomy and especially to anatomical atlases, but it certainly does not aim to replace them. Here you will find all the necessary terms gathered in one place, which you can always have at hand on your phone, e-reader, or laptop. The emphasis on organizing individual anatomical terms into logical units supports a hierarchical view of the architecture of the human body, and the inclusion of a brief introduction to each system is intended to encourage you to seek further, more detailed information about the structure and function of the given organ system.

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E-book

Juraj Černák

A significant part of inorganic chemistry is coordination chemistry, which deals with coordination compounds. Coordination compounds are numerous because they arise from the combination of central atoms, mostly metals, with ligands, and every organic compound is a potential ligand. This is confirmed by a recent report that American scientists M. Brookhart, C. Schauer, and their colleagues from universities in North Carolina and Washington described the preparation of a rhodium complex with methane as a ligand.

This textbook is based on the long-term experience of the author in teaching and testing this subject. The subject is well-covered in several textbooks of varying difficulty in English; their partial list can be found by readers in the list of used literature at the end of this textbook. On the other hand, in Slovak language, coordination chemistry issues are only marginally covered in several textbooks focused more on general inorganic chemistry but lack a comprehensive view on this topic. From this follows the goal of this proposed textbook - to cover the lack of study literature in this area for Slovak language.

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E-book

Milan Žukovič

This textbook is intended for master's degree students and is a follow-up to the Computational Physics I course studied at the bachelor's level. The content of the textbook Computational Physics II focuses on stochastic methods of solving physical problems, mainly on Monte Carlo (MC) simulation of many-particle systems.

The focus on this computationally intensive approach is motivated by the gradual increase in the computing capacities of ordinary computers as well as the introduction of high-performance computing clusters. This has led to significant progress in the development of new simulation techniques, thanks to which MC simulations have found application in various areas of research and application practice. Considering the main research focus of the department, this text is particularly devoted to the presentation of basic and more advanced MC simulation techniques applied to a simple Ising spin model in order to investigate its magnetic, thermodynamic and critical properties.

The next part is devoted to MC simulations of random processes. It focuses on the simplest but also the most basic random walk process and demonstrates its applications in financial analysis and the solution of a quantum system described by the time-dependent Schrödinger equation. The last part is dedicated to the basics of molecular dynamics, applied to simulating the classical movement of atoms in a given force field. By mastering the problems addressed in this course, students will obtain a potential tool for working out of their diploma theses, or a methodology useful for their further scientific and research practice in the field of investigating of complex systems.

The lectured topic is subsequently exercised in the form of preparing projects implemented in the freely distributable software Octave, which is easy on the user's programming skills and which students have the opportunity to familiarize themselves with in the previous study.

Download e-book for free (pdf)

E-book

Jozef Bednarčík (ed.)

The SFEL school is continuation of the Winter Schools of Synchrotron radiation held in 2011, 2013, 2014 and SFEL 2017, 2018 and 2019. All schools of the series were held here, in Liptovský Ján, where our conference venue offers conditions for friendly and creative atmosphere.

The aim of the SFEL 2022 school is to facilitate the growth of a new Slovak research community with high expertise in the area of high-efficiency RTG laser, synchrotron and neutron sources. The SFEL school is designed for efficient transfer of the rapidly developing know-howin these areas to young generation – researchers and university students. The next aim of the SFEL2022 is strengthening of personal connections between the local Slovak research community and actually forming scientific teams of XFEL users, scientific teams of synchrotron or neutron sources users, respectively.

Slovak research community thus can take advantage of the fact that Slovakia is a shareholder of the European XFEL GmbH company in Hamburg, but also makes more efficient use of other closely related scientific facilities, including ILL and ESRF in Grenoble and DESY in Hamburg.

Download the e-book for free (pdf)

E-book

Jana Shepa (ed.)

The book of abstracts from 7th International Conference on Novel Materials: Fundamentals and Applications, NFA 2023 is composed of contributions from the participants of this international conference. The conference consisted of 3 invited lecture and 40 abstracts of participants. The conference is focused on novel materials and its application in various research areas. All contributions are professionally processed and inspiring.

Download the e-book for free (pdf)

E-book

Jozef Strečka,Katarína Karľová

The 48th Conference of the Middle European Cooperation in Statistical Physics (MECO48) will be held on May 22nd-26th, 2023, in Stará Lesná, High Tatras, Slovakia. The MECO48 conference continues a long tradition of regular international meetings in the domain of statistical physics established in the early 1970s with the aim of bridging the gap between the communities of scientists from the Eastern and Western parts of Europe separated by the iron curtain.

In the modern era the MECO conferences attract attention of the community of scientists who are active in the field of statistical physics including various interdisciplinary applications to biology, medicine, geography, finance, quantum information theory, and machine learning.

The MECO48 conference is organized jointly by Faculty of Science of Pavol Jozef Šafárik University in Košice, Institute of Experimental Physics of Slovak Academy of Sciences in Košice, Institute of Physics, Slovak Academy of Sciences in Bratislava and Faculty of Humanities and Natural Sciences, University of Prešov under the financial support of Slovak Research and Development Agency (grant No. APVV-20-0150) and other sponsors.

Download e-book for free (pdf)

E-book

Zuzana Orságová Králová (ed.)

The scientific book of abstracts is a summary of the contributions of teachers, scientists and other conference participants, which contain the original results of their scientific and research activities. Their work will be the subject of the next domestic conference "New trends in chemistry, research and education 2019". The conference is a space for dialogue between scientific academics on the one hand and professional staff and students on the other.

The contributions published in this volume can be divided according to content into the field of analytical, inorganic, physical, organic chemistry, biochemistry and didactics of chemistry. All contributions are interesting and can be used in further creative scientific and research work, in the process of education and in practical work.

Download the e-book for free  (pdf)