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Zuzana Kudličková(ed.)

Proceedings of Abstracts from the Scientific Conference with International Participation Organized on the Occasion of the 50th Anniversary of the Establishment of the Department of Organic Chemistry, Faculty of Science, Pavol Jozef Šafárik University in Košice, held on June 8–10, 2016 in Košice.

The Department of Organic Chemistry was established on February 1, 1966. From its inception, the department’s development prospects have been linked to high-quality scientific research focused on the synthesis of isothiocyanates and the products of their nucleophilic additions. In addition, studies were conducted on the use of cycloaddition, cyclocondensation, and photocyclization reactions of heterocumulenes in the synthesis of heterocycles.

Currently, research at the Department of Organic Chemistry is concentrated on stereoselective syntheses of iminosugars and γ-lactam-β-lactone antibiotics, total synthesis of natural compounds and their analogues possessing a sphingoid structure, research into the synthesis of indole alkaloids from the phytoalexin group, and the synthesis of acetylcholinesterase inhibitors based on acridine and coumarin derivatives.

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Vasyl Cherlinka - Michal Gallay - Yuryi Dmytruk

The textbook is a practical guide to predictive mapping of soil types and properties in R. It bridges digital soil mapping theory with hands-on practice, covering the full workflow from data acquisition and preprocessing to validation and uncertainty quantification. Early chapters introduce the tidyverse ecosystem and the sf and terra packages for spatial data handling. Subsequent parts address modelling of categorical variables (soil types/WRB) and continuous variables (soil organic carbon) using Random Forest, Cubist, and Quantile Regression Forests. Step-by-step code examples show training/testing, feature selection, accuracy metrics, and model interpretation. Reproducibility and cartographic best practice are emphasised. A Slovakia case study demonstrates real-world application while outlining limits and generalisability. The book targets bachelor’s, master’s, and PhD students in geography, geoinformatics, environmental and agricultural sciences, as well as practitioners. Written in English, it fits international courses and mobility programmes.

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Ondrej Krídlo

University textbooks present the basics of knowledge systems, which are divided into two parts. The first part of the publication is devoted to the basis of Formal Concept Analysis, ie the method of data analysis, knowledge representation and information processing, which is based on the formalization of the concept. In the second part we deal with the basics of logic programming, procedural semantics of logic programming, ie programs - theories, questions, SLD-derivation, SLD-tree, search strategies.

University textbooks are intended for students of master's degree programs in computer science.

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Lucia Andrezálová, Zdeňka Ďuračková,Mária Chomová,Vladimír Jakuš, Miriam Ježovičová, Jana Muchová, Zuzana Országhová,Ingrid Žitňanová

Chemistry and biochemistry at medical faculties are integral parts of basic theoretic knowledge of contemporary graduate. Educational book “Textbook of Medical Chemistry” is destined to students of study branches General Medicine and Dentistry for the course “Medical Chemistry”.

It is structured into 13 chapters concerning several topics: general and physical chemistry, organic chemistry, chemistry of natural substances (static biochemistry), enzymology and oxidative stress.

Individual chapters provide comprehensible explanation of the fundamentals of physico-chemical, chemical and biochemical relationships applying in living systems as well as the knowledge of the structure of biologically important molecules (simple molecules and macromolecules) related to their properties and biological function.

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Alena Gessert

Caves have always been very specific places throughout history. In some cultures, they served as sites for sacrifices or remembrance, while in others, they were seen as places where one could cross to the "other side of life." People used caves for shelter, as places to leave messages, to wait out bad weather, and in some cases, even lived in them. During wars in our region, entire families or villages would hide from enemies in caves, or they would use them to conceal weapons.

Today, in most countries, caves are destinations for tourists who want to experience something new and unknown: darkness, high humidity, and the fascinating beauty of underground formations. They are also sought after by cavers who long to explore caves, enter worlds where no human has set foot before, find evidence of previous habitation, or conduct research that continually advances our knowledge.

In the publication you are holding, we present both traditional and less conventional topics about the formation of karst and caves, selected ecological aspects, maps and their creation, significant caves of the world, and the life of people in such areas. We also offer an overview of important karst locations that are definitely worth learning more about or visiting in person. This publication is intended for readers among pupils, students, teachers, and the general public, and we believe it will draw you into this mysterious world.

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Ivan Potočňák a kol.

The textbook represents a study literature on the subject of General chemistry, which is a compulsory subject of bachelor courses in Chemistry and Chemistry -  interdisciplinary study, the first year. This textbook contains 15 + 2 chapters in the whole range of 170 pages that follow the content of lectures and by means of examples and theoretical tasks consolidate and extend knowledge gained from lectures.

 Mária Kožurková - Martin Putala 

Cieľom tejto knihy je spracovať názvoslovné zásady a pravidlá, podľa ktorých sa tvoria slovenské názvy biochemických zlúčenín. Táto monografia je po dlhšom čase prvým pokusom o spracovanie tohto problému, a preto dúfame, že bude pomôckou a prínosom nielen pre študentov a učiteľov ale aj vedeckých pracovníkov. Poslúži aj študentom stredných škôl, ktorí majú záujem o biochémiu a molekulovú biológiu. Kniha obsahuje najnovšie názvoslovie, zásady a pravidlá pri tvorbe názvov biochemických zlúčenín. Kniha plne aplikuje odporúčania spoločnej komisie Medzinárodnej únie pre teoretickú a aplikovanú chémiu (IUPAC) a Medzinárodnej únie pre biochémiu a molekulárnu biológiu (IUBMB) so zahrnutím aktuálnych úprav názvoslovia, stereochémie a grafického znázornenia štruktúr podľa IUPAC. 

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Monika Balogová - Viktória Vargová - Kristián Gulyás - Natália Pipová - Dalibor Uhrovič -Marcel Uhrin

A peer-reviewed publication dealing with the biology and ecology of the European green toad, bringing new findings through scientific research on the roosting ecology, spatial activity and dispersal of this protected species in urban environments. The subject matter of this publication is highly topical, as amphibians represent the most threatened vertebrate group in the world. This work is suitable not only for university students interested in batrachology, amphibian ecology, and vertebrate zoology, but also for conservation workers, municipalities, and specialists directly involved in the reconstruction of urban areas with green toads. Last but not least, this publication is suitable for enthusiasts with an interest in nature and its conservation.

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Marián Kireš - Renáta Orosová a kol.

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Jozef Kováčik

These "Exercise Manuals" present a concise overview of commonly used methodologies as well as progressive techniques, such as the use of liquid chromatography and fluorescence microscopy. Individual tasks were selected based on the research focus of the Department of Botany at the Faculty of Science, Pavol Jozef Šafárik University in Košice, particularly in the context of "stress physiology."

Some tasks can also be utilized within the subject "Plant Ecology." Chamomile (Matricaria chamomilla) is typically used as a model plant for individual tasks due to its long-standing history of research at the Department of Botany and its ease of cultivation under laboratory conditions. The chapters also briefly discuss the significance of monitored parameters, principles of their determination, and metabolism (formation or degradation), aiming to indicate their mutual context.

This approach highlights that determining an individual parameter cannot provide a general explanation for the overall causes and impacts of observed changes; however, it can serve as a basis for testing hypotheses at the level of other parameters.

For deeper study of specific issues, there is an abundance of high-quality international monographs and review articles available.

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E-book

Peter Fedoročko (ed.)

Proceedings of the 7th Annual Doctoral Spring School 2020

From November 10 to November 11, 2020, the 7th annual Spring School for Doctoral Students at Pavol Jozef Šafárik University in Košice will take place in Košice in a modified mode in the on-line space. The scientific program of the spring school will comprise 2 plenary lectures by leading scientific experts of Pavol Jozef Šafárik University in Košice. Doctoral students will present their research papers in two sections: 24 doctoral students of Faculty of Public Administration, Faculty of Law and Faculty of Arts, and 22 doctoral students of Faculty of Medicine and Faculty of Science.

The scientific programme of the spring school will also include a panel discussion with the management of Pavol Jozef Šafárik University in Košice.

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Miroslava Martinková

This electronic material provides the basic principles of creating a systematic nomenclature of organic compounds, from the simplest hydrocarbons to the more complicated nomenclature of carbohydrates. For some groups of derivatives, alternative ways of generating system names are also mentioned, as well as the most common trivial names that are still in use in the literature and in practice, in some cases being the characteristic (dominant) ones. In the introductory section, the basic rules to be respected when writing names of organic compounds are discussed. This document is intended primarily for interdisciplinary undergraduate and graduate students as support material for the courses Organic Chemistry and Selected Chapters in Organic Chemistry and Biochemistry. In the final section of this document, solved examples are given so that the student can check how the rules for forming the names of organic compounds have been understood.

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Zuzana Orságová Králová (ed.)

The scientific book of abstracts is a summary of the contributions of teachers, scientists and other conference participants, which contain the original results of their scientific and research activities. Their work will be the subject of the next domestic conference „New Trends in Chemistry, Research and Education at Faculty of Science of P. J. Šafárik University in Košice 2020“. The conference is a space for dialogue between scientific academics on the one hand and professional staff and students on the other.

The contributions published in this volume can be divided according to content into the field of analytical, inorganic, physical, organic chemistry, biochemistry and didactics of chemistry. All contributions are interesting and can be used in further creative scientific and research work, in the process of education and in practical work.

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Mária Ganajová

The current teaching of chemistry has its specific problems. On one hand, due to the shift of the focus of chemistry curriculum towards theoretical content, the difficulty of chemistry material has increased, and in connection with this, students' interest in chemistry has decreased.

The lack of student interest in chemistry is mostly supported by the opinion that it is precisely chemistry that significantly contributes to the deterioration of environmental quality. On the other hand, we live in an era where we encounter chemical products practically everywhere. It is necessary to learn the basics of chemistry as well as possible, which makes the question of increasing interest in chemistry education and improving its effectiveness very relevant. State educational programs have been introduced into Slovak schools as a foundation for the creation of school educational programs. These emphasize not only acquiring a certain amount of knowledge but also the development and enhancement of key and specific competencies of students, preparing them for lifelong learning and their application in life.

Therefore, increasing attention is being paid to one of the fundamental didactic tools for raising student activity in teaching, and thus improving the effectiveness of chemistry education – learning tasks. From both theory and practice of chemistry teaching, we know that learning tasks, questions, examples, exercises, etc., are among the important components of every teaching lesson. Learning tasks are applied in all phases of teaching – in the motivational phase, the phase of acquiring knowledge, the phase of consolidating knowledge, and the phase of checking the acquired knowledge. It is therefore clear that every teacher will sooner or later find themselves in a situation where they will have to select learning tasks from textbooks, workbooks, collections of problems and examples, or create them themselves.

This scientific monograph is intended for educational specialists and chemistry teachers, aiming to familiarize them with examples of various types and forms of learning tasks and the basics of their creation in chemistry. It can also be helpful for them in preparing certification works focused on test creation and their statistical evaluation.

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Andrea Morovská Turoňová - Renáta Oriňaková - František Kaľavský 

The university textbooks "Practical Exercises in Physical Chemistry" are intended as teaching literature for students of the 2nd year of the Chemistry study program and the 3rd year of the interdisciplinary study program at the Faculty of Science of the Pavel Jozef Šafárik University in Košice.

The three chapters summarize the basic knowledge of thermodynamics, electrochemistry and kinetics, the next chapter deals with the measurement of some other physico-chemical quantities. The tasks developed on the basis of cooperation with the Criminalistics and Expertise Institute of the Police in Košice, which also participates in the innovation of practical teaching, are also very attractive and interesting for students. Thematic units are updated and supplemented by new knowledge, principles as well as detailed working procedures using new instrumentation.

The aim of laboratory exercises in physical chemistry is to illustrate and confirm the physicochemical laws and correlations that apply to the quantitative description of chemical phenomena. Students will learn to use instruments and equipment that occur in physico-chemical laboratories, they will learn the principles of accurate and correct quantitative measurement of physical quantities, important from a chemical point of view. They can also develop professional and scientific communication skills, and we want to support their creative approach to making measurement protocols.

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Katarína Štrofeková

Cell Biophysics II is the one semester comprehensive course textbook for PhD students. It encompasses basic principles and mechanisms underlying cell physiology and biophysics with aims:

• General knowledge of the principles of cellular function, including membrane, cytoplasmic and nuclear roles in normal and abnormal conditions.
• In-depth understanding of the mechanisms underlying the cell functions at the molecular and subcellular level.
• Awareness of cell pathologies that lead to specific disease symptoms and phenotypes.
• The ability to apply learned principles to solve new problems (analysis & synthesis).

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