Biology & Ecology (e-books)

E-book

Lenka Mártonfiová (ed.)
The Index Seminum 2026 of the Botanical Garden of the Pavol Jozef Šafárik University contains a list of 209 seed samples offered for the international exchange among botanical gardens on the world. It includes seeds collected from the wild plants in natural localities of Slovakia with a detailed description of the localities with coordinates and date of collection (70 samples) and seeds of plants grown in the Botanical Garden (16 samples) and seeds from Exposition of the Tatra Mountain Nature of the State Forests of Tatra National Park, Tatranská Lomnica (74 samples) as well as 49 seed samples from Hrádocké Arboretum of the Secondary Forestry School of Jozef Dekret Matejovie in Liptovský Hrádok. The index includes a desiderata table that can be used when ordering seeds.
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E-publication

Beáta Valkay ed.
Ivana Slepáková-Andrej Mock a kol.

The publication EFFUSE – River Landscape, Volume 2: Guidelines for Experts, developed within the EFFUSE project, is intended for professionals in the field of environmental sciences. It provides recommendations for research in river landscapes and highlights their importance for understanding ecological processes. The text presents bioindicators as a key tool for assessing landscape health and biodiversity conservation. A dedicated section explains why studying river landscapes as natural laboratories is essential. The publication also includes a practical manual for the Olympus DSX-1000 High End Model microscope, expanding opportunities in scientific education and research. In this way, it combines theoretical guidelines with modern technologies that enhance environmental knowledge.

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E-publication
Beáta Valkay ed.
Ivana Slepáková-Andrej Mock a kol.

The textbook EFFUSE – River Landscape, Volume 1: Scientific Education for Everybody, developed within the EFFUSE project, explores the importance of water for living organisms and the specific features of water in the Transcarpathian region. It addresses the issue of water pollution and presents bioindication as an effective method of environmental research. The publication explains how the ecological status of rivers and water quality can be assessed using aquatic plants, insects, fish, and amphibians. It also raises awareness about the microbial composition of water and offers guidance on protecting oneself from waterborne infections. Finally, it highlights the significance of environmental education and awareness in strengthening the relationship between humans and the natural environment.

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E-publication

Beáta Valkay ed.
Ivana Slepáková-Monika Balogová a kol.

EFFUSE - Scientific Education for Advanced is an educational material designed for university students interested in ecological sciences, biology and environmental protection. The publication was developed as part of the EFFUSE project and focuses on the scientific investigation of living organisms in the river ecosystem, with an emphasis on their ecological role and importance as bioindicators. The river ecosystem is a dynamic environment where a wide range of organisms can be studied, from algae and phytoplankton to aquatic invertebrates, fish, amphibians and reptiles. This publication presents a detailed study of their adaptations, life cycles, reproductive strategies and their importance for ecological balance. Particular attention is paid to fish and amphibians, whose environmental demands and sensitivity to pollution make them important indicators of water quality and environmental status. The publication also provides guidance on how to integrate their study into university education in the form of practical research. It also includes a chapter on science education in the context of sustainable development, which is often absent from university curricula in Slovakia and Ukraine. This material promotes the link between theory and practice and develops students' scientific thinking in order to prepare them to meet the environmental challenges of the future.

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E-publication

Michal Goga-Marko S. Sabovljević-Martin Bačkor-Dajana Kecsey-Deepti Routray

A comprehensive guide that introduces you to the fascinating diversity and systematics of lower plants. These practical lessons are designed to provide hands-on training, allowing students to engage directly with the interesting study of Cryptogams by observation, analysis, and identification and experimentation. Beginning with the overall idea of cryptogam in a field trip near by the vicinity of Botanical garden then followed by the basics of microscopy in, will help to gain essential skills in understanding the components and proper usage of a microscope, a fundamental tool in botanical studies.

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E-publication

Eva Slabá-Helena Mičková-Jozef Židzik-Lucia Klimčáková-Janka Vašková

Teaching texts „Practical Lessons in Medical biology“ provide the theoretical foundations of microscopy, various microscopic techniques and preparation of microscopic slides in an understandable form. The chapters of the teaching texts contain model questions and tasks from cytology, molecular biology and genetics enabling students to acquire new knowledge from individual thematic areas and provide instructions for the implementation of tasks during laboratory lessons in medical biology. Teaching texts are primarily intended for the practical lessons in the subjects Biology 1 and Biology 2 for foreign students of the first year of General Medicine and the subjects Medical Biology and Genetics and Regenerative Medicine for foreign students of the first and second year of Dental Medicine at P. J. Šafárik University in Košice – Faculty of Medicine.

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E-kniha

Pavol Mártonfi - Lenka Mártonfiová (eds.)

The book of abstracts from the conference with international participation contains 33 contributions authored by 71 researchers affiliated with botanical institutions from Slovakia, the Czech Republic, Poland, and Hungary. The publication offers an overview of current knowledge and research experience in the field of plant biodiversity in the context of climate change. In addition to botany and nature conservation, the abstracts also address topics such as plant physiology, the production of secondary metabolites, environmental studies, management of protected areas, botanical art, and other current research issues. The central paper is dedicated to the 75th anniversary of the UPJŠ Botanical Garden, highlighting its history and present-day activities, and was prepared by the garden’s director. The volume is complemented by contributions from the garden’s staff, focusing on the current state of research and educational activities within the institution.

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E-book

Lenka Mártonfiová - Pavol Mártonfi (eds.)

Katalóg zbierkového fondu rastlín obsahuje súpis 4437 druhov, poddruhov a kultivarov rastlín rastúcich voľne alebo pestovaných v Botanickej záhrade Univerzity Pavla Jozefa Šafárika v Košiciach (Slovensko). Medzi nimi sa v botanickej záhrade pestuje 659 druhov chránených na základe Dohovoru o medzinárodnom obchode s ohrozenými druhmi voľne žijúcich živočíchov a rastlín (CITES) a 42 autochtónnych druhov je chránených legislatívou Slovenskej republiky.

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E-book

Lenka Mártonfiová

Index The Index Seminum 2025 of the Botanical Garden of the Pavol Jozef Šafárik University contains a list of 243 seed samples offered for the international exchange among botanical gardens on the world. It includes seeds collected from the wild plants in natural localities of Slovakia with a detailed description of the localities with coordinates and date of collection (66 samples) and seeds of plants grown in the Botanical Garden (46 samples) and seeds from Exposition of the Tatra Mountain Nature of the State Forests of Tatra National Park, Tatranská Lomnica (73 samples) as well as 58 seed samples from Hrádocké Arboretum of the Secondary Forestry School of Jozef Dekret Matejovie in Liptovský Hrádok. The index includes a desiderata table that can be used when ordering seeds.

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E-book

Lenka Mártonfiová (ed.)

The Index Seminum 2024 of the Botanical Garden of the Pavol Jozef Šafárik University contains a list of 260 seed samples offered for the international exchange among botanical gardens on the world. It includes seeds collected from the wild plants in natural localities of Slovakia with a detailed description of the localities with coordinates and date of collection (111 samples) and seeds of plants grown in the Botanical Garden (23 samples) and seeds from Exposition of the Tatra Mountain Nature of the State Forests of Tatra National Park, Tatranská Lomnica (64 samples) as well as 62 seed samples fromHrádocké Arboretum of the Secondary Forestry School of Jozef Dekret Matejovie in Liptovský Hrádok. The index includes a desiderata table that can be used when ordering seeds.

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E-book

Lenka Mártonfiová (ed.)

The Index Seminum 2023 of the Botanical Garden of the Pavol Jozef Šafárik University contains a list of 291 seed samples offered for the international exchange among botanical gardens on the world.

It includes seeds collected from the wild plants in natural localities of Slovakia with a detailed description of the localities with coordinates and date of collection (92 samples) and seeds of plants grown in the Botanical Garden (25 samples) and seeds from Exposition of the Tatra Mountain Nature of the State Forests of Tatra National Park, Tatranská Lomnica (69 samples) as well as 105 seed samples from Hrádocké Arboretum of the Secondary Forestry School of Jozef Dekret Matejovie in Liptovský Hrádok.

The index includes a desiderata table that can be used when ordering seeds..

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E-book

Lenka Mártonfiová (ed.)

The Index Seminum 2022 of the Botanical Garden of the Pavol Jozef Šafárik University contains a list of 246 seed samples offered for the international exchange among botanical gardens on the world. It includes seeds collected from the wild plants in natural localities of Slovakia with a detailed description of the localities with coordinates and date of collection (99 samples) and seeds of plants grown in the Botanical Garden (12 samples) and seeds from Exposition of the Tatra Mountain Nature of the State Forests of Tatra National Park, Tatranská Lomnica (58 samples) as well as 77 seed samples from Hrádocké Arboretum of the Secondary Forestry School of Jozef Dekret Matejovie in Liptovský Hrádok. The index includes a desiderata table that can be used when ordering seeds.

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E-book

Lenka Mártonfiová

The Index Seminum 2021 of the Botanical Garden of the Pavol Jozef Šafárik University contains a list of 131 seed samples offered for the international exchange among botanical gardens on the world. It includes seeds collected from the wild plants in natural localities of Slovakia with a detailed description of the localities with coordinates and date of collection (72 samples) and seeds of plants grown in the Botanical Garden (5 samples) and seeds from Exposition of the Tatra Mountain Nature of the State Forests of Tatra National Park, Tatranská Lomnica (54 samples). The index includes a desiderata table that can be used when ordering seeds.

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E-book

Lenka Mártonfiová - Pavol Mártonfi (eds.)

The Catalogue of Plant Collections contains a list of 4136 species, subspecies and cultivars of plants growing wild or grown in the Botanical Garden of the Pavol Jozef Šafárik University in Košice (Slovakia). Among them 652 plant species endangered according to CITES (Convention on International Trade in Endangered Species of Wild Fauna and Flora) are grown in the botanical garden as well as 39 autochtonous plant species are protected by Slovak law.

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E-book

Lenka Mártonfiová - Martin Suvák - Pavol Mártonfi (eds.)

Conference 70 Years of the Botanical Garden of Pavol Jozef Šafárik University. Slovakia, Košice 3. – 4. September 2020

The book of abstracts from the conference with international participation includes 38 abstracts from a total of 76 authors from various botanical institutions from Slovakia, the Czech Republic, Germany, Poland, Ukraine and the United Kingdom.

It presents an overview of knowledge and experience from the history and the present of botanical research and nature conservation. In addition to botany and nature conservation, the abstracts also cover the field of plant physiology, production of secondary metabolites, environmental studies, management of protected areas, bioinformatics and other topical research problems. The main paper is dedicated to the 70th anniversary of the UPJŠ Botanical Garden, its history and the present and was prepared by the director of the UPJŠ Botanical Garden. It is completed by the papers from the staff of this botanical garden devoted to the current state of research and educational activities in the botanical garden.

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E-book

Marcel Uhrin - David Jandzik - Andrej Čerňanský - Michal Rindoš - Blanka Lehotská - Stanislav Danko - Ján Kautman - Peter Mikulíček - Peter Urban - Daniel Jablonski

Bibliographies provide basic scientific information, illustrate quality and intensity of research in a particular topic, area, or time, and thus help build a cultural-historical perspective of society’s appreciation of knowledge and education. Here we provide a bibliography of herpetological research in the region of Slovakia between the years 1791 and 2017. We collected 2,183 references authored by 1,453 different authors and covering all species of amphibians (18) and reptiles (13) occurring in Slovakia and, in addition, amphibian and reptile taxa occurring in 94 other countries.

Most of the contributions were published in popular magazines and non-indexed journals, while only about 12% of all references represent scientific articles from journals indexed in relevant scientific databases. The extensiveness of study on amphibians and reptiles has varied among different periods within the selected time frame. However, an obvious intensification in the field of herpetology can be observed, especially during the second half of the 20th century. While there have only been few professionals specialized in herpetology, an important role in promoting the research and conservation of amphibians and reptiles in Slovakia has been played by non-governmental organizations and hobbyists. The most frequent type of herpetological data in the referenced literature comes from faunistic research, followed by conservation and general information on herpetofauna, with the majority of published articles in indexed journals coming from the fields of palaeontology, phylogeography, and population genetics.

The presented bibliography is the first step towards building a solid base for future systematic herpetological research in the country and Central Europe.

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E-book

Katarína Štrofeková

Cell Biophysics II is the one semester comprehensive course textbook for PhD students. It encompasses basic principles and mechanisms underlying cell physiology and biophysics with aims:

• General knowledge of the principles of cellular function, including membrane, cytoplasmic and nuclear roles in normal and abnormal conditions.
• In-depth understanding of the mechanisms underlying the cell functions at the molecular and subcellular level.
• Awareness of cell pathologies that lead to specific disease symptoms and phenotypes.
• The ability to apply learned principles to solve new problems (analysis & synthesis).

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Norbert Kopčo - Frederick Gallun - Beáta Tomoriová - Ľuboš Hládek(eds.)

Cognitive neuroscience is a fast developing scientific field which aims at uncovering the neural basis of human perception and cognition. To achieve this goal, cognitive neuroscience uses a variety of tools and approaches ranging from non-invasive brain imaging to psychophysics and neural modeling. Mastering such tools requires skills and knowledge from multiple scientific domains, including neurophysiology, cognitive psychology, and several computational fields.

Access on request via email: kogneuro (@) gmail.com

http://pcl.upjs.sk/workshopcd 

https://sites.google.com/site/kogneuro/

E-book

Božena Velebná

The following material has been created during the two years of teaching English for Chemists at the Faculty of Science of the Pavol Jozef Šafárik University and is therefore designed to meet the needs of this course. The main motivation was the lack of appropriate materials, especially as the groups generally comprise students with a very diverse level of English. This diversity therefore became the main criterion determining both the form and the content of this text.

In the ten units that provide material for a one semester course, the emphasis is put on teaching the students vocabulary and terminology, which is introduced via authentic texts, depending on the topic of each unit. Students are encouraged to learn the meaning of new words in context. Grammar is included too, with the aim of demonstrating and explaining grammatical rules by means of examples taken directly from the texts. For the more advanced students, grammatical exercises in this material can serve for revision while the beginners might need more supplementary materials.

I hope that this material, the preparation of which has been a challenging as well as enjoyable experience will be useful for future teachers and the students of this course.

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